FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001271118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001271118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23889322
Sequences flagged as poor quality0
Sequence length90
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1791000.7497073378641721No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA437250.18303156531608558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)