FastQCFastQC Report
Wed 8 May 2024
EGAF00001271969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001271969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1751428
Total Bases175.1 Mbp
Sequences flagged as poor quality0
Sequence length100
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30480.17402942056424814No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24330.1389152166118162No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)