FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001272062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001272062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1105150
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC12720.11509749807718408No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA11990.10849205990137085No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG11770.10650137990318057No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)