FastQCFastQC Report
Thu 23 Feb 2023
EGAF00001272440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001272440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92767712
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1383260.14911006967596657No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1089860.11748268621737702No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA960880.10357914184624926No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)