FastQCFastQC Report
Tue 19 Sep 2023
EGAF00001281635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001281635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45479290
Sequences flagged as poor quality0
Sequence length49-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT858700.18881121495080508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)