FastQCFastQC Report
Mon 18 Sep 2023
EGAF00001281694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001281694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42667111
Sequences flagged as poor quality0
Sequence length49-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA862050.2020408646838076No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT636550.14918985257755088No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)