Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001281716 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 41838773 |
Sequences flagged as poor quality | 0 |
Sequence length | 49-76 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 368684 | 0.8812017503476979 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC | 122938 | 0.29383748897225065 | TruSeq Adapter, Index 5 (100% over 50bp) |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 87284 | 0.20861988471793852 | No Hit |