FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001299823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001299823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences365309
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG12020.32903651429337905No Hit
GATCGGAAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGGCG11460.3137070261066659No Hit
GATCGGAAGAGGGGCGGGGAGGGGAAGAGGGGAGAACTCGGGGGGCGGCG8760.23979699377787025No Hit
GATCGGAAGAGGGGCGGGGAGGGGAAGAGGGGAGAACTCGGGGGGCGCCG6340.1735517055424312No Hit
GATCGGAAGAGCGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG5540.15165243670426953No Hit
GATCGGAAGAGGGGCGGGTAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG5300.14508265605282103No Hit
GATCGGAAGAGCGGCGGGTAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG4530.12400460979609045No Hit
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG4310.11798231086559596No Hit
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGGCG3690.10101037751602068No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)