FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001299871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001299871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1071136
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAACCTTTCTTTTCATAGAGCAGTTAGGAAACACTCTGTTTGTAAAGTCT15900.1484405341618618No Hit
TAAACTCTGTGAGTTGAACGCACACATCACAAAGGAGTTTCTGAGAATCA13250.12370044513488483No Hit
TAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA12920.12061960385982733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)