FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001299989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001299989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences851296
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40510.47586268465962483No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA14600.17150321392324175No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA13780.16187084163440213No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)