FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001299991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001299991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences679401
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27230.400794229034105No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA12670.18648780322666586No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA11050.16264326958600298No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)