FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001300033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1434758
Sequences flagged as poor quality0
Sequence length93-151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG215201.4999045135137772No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA16330.11381710365092929No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTGATAAGCAACTTCAGCAAAGTCT15180.10580181466142721No Hit
AGTGGGATTCCTGCTGTCAGTTAAAAAGTCAGGAAACAACAGGTGCTGGA14460.10078354677234769No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)