FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001300053

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300053
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1174876
Sequences flagged as poor quality0
Sequence length139-151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG179551.5282463851504329No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA14140.12035312662783137No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTGATAAGCAACTTCAGCAAAGTCT12670.10784116791899741No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTAGTTTTTTCCAATTCTGTGAAGA12520.10656443743850416No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)