FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001300059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences822104
Sequences flagged as poor quality0
Sequence length139-151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG94241.1463269853935756No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACAATGGGG14590.1774714634644765No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA12210.1485213549623892No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA10930.13295154870916576No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTAGTTTTTTCCAATTCTGTGAAGA9980.12139583313060147No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA9800.11920632912624193No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTGATAAGCAACTTCAGCAAAGTCT9230.11227289977910337No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCCTTGAGTTGAACACACACATCA8730.10619094421143796No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACGATGGGG8650.10521783132061151No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTTTCTTTTCATAGAGTAGTTTGGA8560.10412307931843172No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)