FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001300887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1856261
Sequences flagged as poor quality0
Sequence length32-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA22440.12088817251453324No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN20500.11043705599589712No Hit
TAACCTTTCTTTTCATAGAGCAGTTAGGAAACACTCTGTTTGTAAAGTCT18660.10052465682358246No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)