FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001300913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1034801
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAACCTTTCTTTTCATAGAGCAGTTAGGAAACACTCTGTTTGTAAAGTCT17090.1651525269109713No Hit
TAAACTCTGTGAGTTGAACGCACACATCACAAAGGAGTTTCTGAGAATCA13640.13181278332742238No Hit
TAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAA12370.11953989221115945No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)