FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001300921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001300921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1189515
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG21670.18217508816618538No Hit
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGGGCCG19460.1635960874810322No Hit
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGAACTCGGGGGGGGCCG17130.1440082722790381No Hit
GATCGGAAGAGGGGCGGGGAGGGGAAGAGGGGAGATCTCGGGGGGCGCCG15740.13232283745896437No Hit
GATCGGGAGAGGGGCGGGGAGGGGAAGAGGGGAGAACTCGGGGGGCGCCG13670.1149207870434589No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)