Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001300936 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 446595 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTAT | 9555 | 2.139522386054479 | TruSeq Adapter, Index 6 (97% over 36bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCGCGTAT | 981 | 0.21966210996540492 | TruSeq Adapter, Index 6 (97% over 36bp) |
CATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTAT | 543 | 0.12158667248849629 | TruSeq Adapter, Index 3 (97% over 34bp) |
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA | 498 | 0.11151042891210158 | No Hit |