FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001301035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2036642
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG78000.3829833618279501No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA37680.18501042402150206No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA37460.18393021453942324No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)