FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001301041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1961264
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58230.2969003662943897No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA38680.19721975215983165No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA36470.18595150882288158No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)