FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001301053

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301053
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences861431
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70510.818521738827602No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA15440.17923664228475641No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA14660.17018194144394616No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)