FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001301199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences853650
Sequences flagged as poor quality0
Sequence length139-151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG112121.313418848474199No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACAATGGGG14450.1692731213026416No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA12080.14150998652843672No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA10910.127804135184209No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA9950.11655830844022727No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTAGTTTTTTCCAATTCTGTGAAGA9850.11538686815439583No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACGATGGGG9500.11128682715398583No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTTTCTTTTCATAGAGTAGTTTGGA9160.10730393018215896No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTGATAAGCAACTTCAGCAAAGTCT8940.10472676155332981No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)