FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001301201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences855280
Sequences flagged as poor quality0
Sequence length137-151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100021.1694415863810683No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACAATGGGG13980.16345524272752784No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA12420.14521560190814703No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA11500.13445889065569172No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTAGTTTTTTCCAATTCTGTGAAGA10710.12522214947151808No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACGATGGGG9840.11505004209147882No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTTTCTTTTCATAGAGTAGTTTGGA9810.1146992797680292No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA9400.10990552801421756No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCTGATAAGCAACTTCAGCAAAGTCT9120.10663174632868767No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)