FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001301339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1761336
Sequences flagged as poor quality0
Sequence length139-151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG83000.47123320025253557No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA28910.16413676890723858No Hit
AGTGGGATTCCTGCTGTCAGTTAATTCCATTCCATTCCATTCCATTCCAT19330.10974623808290979No Hit
AGTGGGATTCCTGCTGTCAGTTAATTCCATTCCATTCCATTCGATTGCAA18960.1076455599613021No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)