FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001301349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001301349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1734900
Sequences flagged as poor quality0
Sequence length136-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG181651.0470344112052568No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA33360.19228773992737333No Hit
AGTGGGATTCCTGCTGTCAGTTAATTCCATTCCATTCCATTCCATTCCAT25220.14536860914173727No Hit
AGTGGGATTCCTGCTGTCAGTTAATTCCATTCCATTCCATTCGATTGCAA20590.11868119199953887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)