Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001301354 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1278187 |
Sequences flagged as poor quality | 0 |
Sequence length | 138-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCAGAAATCTCGTAT | 13129 | 1.0271579980081162 | TruSeq Adapter, Index 13 (97% over 38bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCAGAAATCGCGTAT | 1602 | 0.12533377354017838 | TruSeq Adapter, Index 13 (97% over 38bp) |
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA | 1279 | 0.10006360571653443 | No Hit |