FastQCFastQC Report
Fri 30 Dec 2022
EGAF00001302081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences349927185
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG148324774.238732409429693TruSeq Adapter, Index 7 (97% over 37bp)
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC109484833.1287889221867684No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCAACTCGTATG7285070.20818816920440178TruSeq Adapter, Index 7 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCAGCTCGTATG6989640.1997455556360961TruSeq Adapter, Index 7 (97% over 37bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCACCTCGTATG5110030.14603123789882172TruSeq Adapter, Index 7 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)