FastQCFastQC Report
Fri 16 Dec 2022
EGAF00001302098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences397260126
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGATAGGGTGTAGATCTC163471204.114966222409143Illumina Single End PCR Primer 1 (96% over 33bp)
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC16303720.4104041390753624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)