Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001302339 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 915066 |
Sequences flagged as poor quality | 0 |
Sequence length | 138-151 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTAT | 20587 | 2.2497830757562842 | TruSeq Adapter, Index 7 (97% over 35bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCGCGTAT | 1996 | 0.21812634279931722 | TruSeq Adapter, Index 7 (97% over 35bp) |
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA | 1051 | 0.11485510334773667 | No Hit |
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA | 1025 | 0.11201377824113232 | No Hit |