FastQCFastQC Report
Fri 2 Sep 2022
EGAF00001302420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences337079
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG176455.234677924166145No Hit
AGTGGGATTCCTGCTGTCAGTTAAACCGGCATACAGCAACAACATGGCCT5080.15070651093660536No Hit
AGTGGGATTCCTGCTGTCAGTTAATCAGCCACAGCCCGGCGCGGTGTGCC4800.1423998528534854No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)