FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001302448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences917770
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG469605.116750384083158No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTTGGAGCTG136221.4842498665242925No Hit
CTGAATTAGCTGTATCGTCAAGGCACTCTTGCCTACGCCACCAGCTCCAA125431.366682284232433No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGGCGGTAGTTGGAGCT35250.3840831580897175No Hit
CTGAATTAGCTGTATCGTCAAGGCACTTTTGCTTACGCTACCAGCTCCAA33060.3602209703956329No Hit
GAAGCGTCTCATGCTGGATCCCCACTTTTCCTCTTGCAGCAGCCAGACTG17260.1880645477625113No Hit
CAGCCCAACCCTTGTCCTTACCAGAACGTTGTTTTCAGGAAGTCTGAAAG15910.1733549800058838No Hit
GAAGATCCGCGACTGGTACCAGAAGCAGGGGCCCGGGCCCTCCCGTGACT15520.1691055493206359No Hit
TTCATGCTCAGCTGTGACTGCAGCTCAAGACCCTGGAGGGTGCGCCGCAG9220.10046089978970765No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)