FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001302450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences952490
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG464494.8765866308307695No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTTGGAGCTG141451.485054961206942No Hit
CTGAATTAGCTGTATCGTCAAGGCACTCTTGCCTACGCCACCAGCTCCAA130521.3703031002950161No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGGCGGTAGTTGGAGCT36180.3798465075748827No Hit
CTGAATTAGCTGTATCGTCAAGGCACTTTTGCTTACGCTACCAGCTCCAA34950.3669329861730832No Hit
GAAGCGTCTCATGCTGGATCCCCACTTTTCCTCTTGCAGCAGCCAGACTG18160.19065816963957627No Hit
CAGCCCAACCCTTGTCCTTACCAGAACGTTGTTTTCAGGAAGTCTGAAAG16540.17365011706159644No Hit
GAAGATCCGCGACTGGTACCAGAAGCAGGGGCCCGGGCCCTCCCGTGACT16500.17323016514609077No Hit
TTCATGCTCAGCTGTGACTGCAGCTCAAGACCCTGGAGGGTGCGCCGCAG10110.10614284664405926No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)