FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001302452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences735613
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG370455.035936015268899No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGTGGTAGTTGGAGCTG30360.4127170128858517No Hit
CTGAATTAGCTGTATCGTCAAGGCACTCTTGCCTACGCCACCAGCTCCAA28040.38117869042553626No Hit
GAAGCGTCTCATGCTGGATCCCCACTTTTCCTCTTGCAGCAGCCAGACTG8260.11228730324232986No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA7830.1064418383035645No Hit
ATAAGGCCTGCTGAAAATGACTGAATATAAACTTGGCGGTAGTTGGAGCT7780.10576213307812668No Hit
CTGAATTAGCTGTATCGTCAAGGCACTTTTGCTTACGCTACCAGCTCCAA7530.1023636069509375No Hit
CAGCCCAACCCTTGTCCTTACCAGAACGTTGTTTTCAGGAAGTCTGAAAG7430.10100419650006186No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)