FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001302467

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302467
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences907012
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT353933.902153444496875TruSeq Adapter, Index 27 (97% over 39bp)
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14310.15777079024312798No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)