FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001302520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946906
Sequences flagged as poor quality0
Sequence length139-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG98001.0349496148508934No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCCGCTTTGGCCTGGTGGTTCAAGCG25850.2729943626928122No Hit
AGTGGGATTCCTGCTGTCAGTTAATTGAGAAGAGAGGATTTTCGGCTCAT23010.24300194528284752No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)