FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001302526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1184064
Sequences flagged as poor quality0
Sequence length139-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG195131.6479683530619966No Hit
AGTGGGATTCCTGCTGTCAGTTAAGCCGCTTTGGCCTGGTGGTTCAAGCG16620.1403640343765202No Hit
AGTGGGATTCCTGCTGTCAGTTAATTGAGAAGAGAGGATTTTCGGCTCAT14690.12406423977082319No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)