FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001302554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001302554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1074362
Sequences flagged as poor quality0
Sequence length138-151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTGGGATTCCTGCTGTCAGTTAAGCCGCTTTGGCCTGGTGGTTCAAGCG34200.31832845912271657No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31820.29617577687967367No Hit
AGTGGGATTCCTGCTGTCAGTTAATTGAGAAGAGAGGATTTTCGGCTCAT29050.27039303326067005No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)