Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001302573 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 614004 |
Sequences flagged as poor quality | 0 |
Sequence length | 138-151 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 24438 | 3.98010436414095 | TruSeq Adapter, Index 7 (97% over 36bp) |
CATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 1174 | 0.19120396609794071 | TruSeq Adapter, Index 2 (97% over 35bp) |
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA | 638 | 0.10390811786242435 | No Hit |