Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001302575 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 560251 |
Sequences flagged as poor quality | 0 |
Sequence length | 138-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 22060 | 3.9375208611854333 | TruSeq Adapter, Index 7 (97% over 36bp) |
CATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 966 | 0.1724227176747565 | TruSeq Adapter, Index 2 (97% over 35bp) |
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA | 646 | 0.11530546130216635 | No Hit |