Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001302587 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 917239 |
Sequences flagged as poor quality | 0 |
Sequence length | 138-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 20674 | 2.2539381775088065 | TruSeq Adapter, Index 7 (97% over 36bp) |
CATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT | 2976 | 0.32445196944307864 | TruSeq Adapter, Index 2 (97% over 35bp) |
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA | 943 | 0.10280853736049166 | No Hit |