FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001303688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946986
Sequences flagged as poor quality0
Sequence length139-151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG259462.7398504307349842No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGCACCGCTCGTCGAACGACGCAAG20180.2130971313197872No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG16550.17476499124591072No Hit
AGTGGGATTCCTGCTGTCAGTTAAATGGCGAACAGCCATACCCTTGGGAC15040.15881966576063428No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGGAGGAGTGAAAGCTCCGAACTGA14020.14804865119442104No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG10650.1124620638531087No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGATGGCTGCTTCTAAGCCAACCTC10220.10792134202617568No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG10110.106759762023937No Hit
AGTGGGATTCCTGCTGTCAGTTAACGACCGAGTTCGGAATGGGATCGGGT9810.10359181656328606No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTGGTACGTGAGCTGGGTTCAGAAC9710.10253583474306907No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)