FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001303690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences851608
Sequences flagged as poor quality0
Sequence length136-151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG155361.8243135339264076No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGCACCGCTCGTCGAACGACGCAAG18160.2132436520089055No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG18090.21242167757935573No Hit
AGTGGGATTCCTGCTGTCAGTTAAATGGCGAACAGCCATACCCTTGGGAC13500.15852363998459384No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTT13100.15382664324430959No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGGAGGAGTGAAAGCTCCGAACTGA12970.1523001193037172No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG10820.12705376182468928No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG9960.11695521883307812No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTGGTACGTGAGCTGGGTTCAGAAC9280.10897032437459488No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGATGGCTGCTTCTAAGCCAACCTC9030.10603470141191723No Hit
AGTGGGATTCCTGCTGTCAGTTAACGACCGAGTTCGGAATGGGATCGGGT9030.10603470141191723No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)