FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001303692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences923403
Sequences flagged as poor quality0
Sequence length137-151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG209912.273221984334034No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGCACCGCTCGTCGAACGACGCAAG19910.21561550049111816No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG14690.1590854697244865No Hit
AGTGGGATTCCTGCTGTCAGTTAAATGGCGAACAGCCATACCCTTGGGAC14300.15486196167870367No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGGAGGAGTGAAAGCTCCGAACTGA12940.14013383105751226No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG10760.11652550403236724No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG10380.11241029106468141No Hit
AGTGGGATTCCTGCTGTCAGTTAACGACCGAGTTCGGAATGGGATCGGGT10180.11024438950274149No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTGGTACGTGAGCTGGGTTCAGAAC9950.10775360270651058No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGATGGCTGCTTCTAAGCCAACCTC9890.1071038322379286No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)