FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001303694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences700083
Sequences flagged as poor quality0
Sequence length138-151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG172982.470849884942214No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGCACCGCTCGTCGAACGACGCAAG14380.20540421635720338No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG12370.17669333493314365No Hit
AGTGGGATTCCTGCTGTCAGTTAAATGGCGAACAGCCATACCCTTGGGAC12250.17497925246006546No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGGAGGAGTGAAAGCTCCGAACTGA11250.16069523185108053No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG11060.15798126793537337No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG9260.1322700308392005No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG7820.11170104116226219No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTGGTACGTGAGCTGGGTTCAGAAC7560.1079871958039261No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGGATGGCTGCTTCTAAGCCAACCTC7530.10755867518565657No Hit
AGTGGGATTCCTGCTGTCAGTTAACGACCGAGTTCGGAATGGGATCGGGT7510.10727299477347686No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)