FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001303708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1687380
Sequences flagged as poor quality0
Sequence length137-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG263271.5602294681695883No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA20520.12160864772606053No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACAATGGGG20420.12101601299055341No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA19460.11532671952968507No Hit
AGTGGGATTCCTGCTGTCAGTTAAAGTAGTTTTTTCCAATTCTGTGAAGA17490.10365181524019486No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)