FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001303744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1354112
Sequences flagged as poor quality0
Sequence length139-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG314052.3192320871537953No Hit
AGTGGGATTCCTGCTGTCAGTTAACCCGAATAGAATGGAATGGAATGGAA18150.13403618016825786No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA18080.13351923622270534No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA16590.1225157150959448No Hit
AGTGGGATTCCTGCTGTCAGTTAAGGAGATTTTGGGCTGAGACAATGGGG13940.10294569430002835No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)