FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001303942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001303942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3503354
Sequences flagged as poor quality0
Sequence length138-151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG169500.48382207450346154No Hit
AGTGGGATTCCTGCTGTCAGTTAAACTCTGTGAGTTGAACGCACACATCA51300.14643110573467596No Hit
AGTGGGATTCCTGCTGTCAGTTAACCTTTCTTTTCATAGAGCAGTTAGGA49800.14214949445588426No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)