FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001318918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001318918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1990395
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32250.16202814014303693No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25610.12866792772288918No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)