FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001319509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001319509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4121076
Sequences flagged as poor quality0
Sequence length100
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT76340.18524288316934703No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT62670.152071934611252No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGTATGCCGT52530.12746671015045585No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)