FastQCFastQC Report
Fri 22 Nov 2024
EGAF00001319554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001319554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2050703
Total Bases205 Mbp
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT83200.4057145281398623No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT65940.32154826905700146No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36770.1793043653810425No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)